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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919942.1_cds_XP_016469125.1_61695
CDS Infomation

[gene=LOC107791555] [db_xref=GeneID:107791555] [protein=protein DETOXIFICATION 46, chloroplastic-like] [protein_id=XP_016469125.1] [location=complement(join(8174..8275,8365..8427,8548..8619,9551..9628,10095..10223,10435..10545,10652..10720,10800..10937,11092..11230,12320..12375,13125..13180,13322..13430,13596..13690,13993..14452))] [gbkey=CDS]
Sequence

ATGAATGTTGAAACCCTAACTTGTAAATCTCACATTCCGATAAAAAACCCTAAATTCAAT
CCGAATTTCCATGTTGACTTCTCTTCAACCCGTCTCCGAACTTGTCGGGTTACGCCGTTG
ACCCGAATATGCAATCTCCGCAGGCGAATAATCACCGCTTGTGTAAATCCTAGCCATGAA
ATTCCAGTGAAACTAGAAAGCTTGAATTTGAATTCAAGTATCAGTGAAGAAGCAGATGAA
GAACAAGTAGAAGCAGTAACAGTTCGAGAAGAAATTAATTCAGTGGTGGATTCTAATGGT
AAAGGAGAATTTTCTGGGAATGAAAGCATTTGGGCTCAAGTGGTGGAGATCGTGAAGTTT
TCAGGGCCAGCAGTTGGGCTGTGGGTATGTGGGCCCTTAATGAGTCTCATTGATACCGCT
GTTATTGGTCAAGGAAGTTCCATTGAACTCGCCGCTCTAGGTCCCGGAACTGTGTTTTGT
GATAACACAAGCTATGTTTTTATGTTCCTTTCAATAGCCACTTCAAATCTAGTTGCTACT
GCACTGGCCGGGCAGGATAAAAATGAAGTTCAACATCAGATATCTATATTGCTTTTCATT
GGGTTGGCCTGTGGTGTTGTGATGTTTGTCTTTACAAGATTGCTTGGTACTTGGGGACTG
ACTGCTTTCACAGGGGCAAAGAACACAGAAATAATAAATGCAGCGAATACTTATGTCCAG
ATTCGAGGCTTTGCATGGCCAGCCATGCTGGTTGGTTGGGTTGCCCAAAGTGCAAGTCTA
GGCATGAAAGATTCGTGGGGACCTTTAAAGGCTTTGGCAGTTGCCACTGTTATTAATGGC
ATTGGCGACATAGTCTTATGCAGATTCTTTGGATATGGTATTGCTGGAGCAGCATGGGCA
ACAATGGTCTCCCAAGTTGTTGCAGCTTATATGATGATTGAGGCACTGAACAATAAAGGA
TATAATGGTTTTGCCATATCTGTTCCATCATTGAATGAAGTTCTACAGATTTTCATACTT
GCAGCACCTGTGTTCCTAACAATGATGTCAAAGGTGGCATTCTATTCTCTACTTGTCTAC
TATGCTACATCAATGGGCACAAACACTGCTGCTGCACATCAGGTCATGCTACAACTATTC
TGCATATGTGCAGTATGGGGTGAGCCTCTCTCTCAAACAGCGCAGTCATTTATGCCTGAA
TTGTTATATGGAGTGAATCGGAACTTGTCAAAGGCCCGGATGCTGCTGAAGTCCCTTTTA
ATCATTGGAGCATCAAATGGATTATTACTGGGATCTGTCGGAGTGTCAGTTACATGGTTT
TTCCCCAAAATATTTTCACCTGATCCTCTGGTCATAGAAGAGATGCACAAAGTATTGCTG
CCATTATTTCTAGCTCTCTGGGTCTCACCGTGTGTTCATAGTCTTGAGGGAACCTTGTTG
GCTGGACGGGACTTAAAATTTATTAGCATATCAATGACCGCAGTATTTGGTTTGGCCTCT
CTTCTCGTCATGCTCTTGAGCAGTAAAGGATTTGGTTTGCCCGGATGCTGGTTTGCGCTA
GTAGCATTTCAATGGTCACGATTTTCAATTGCTCTACGGAGGCTTACTTTGGCAGATGGC
ATGCTTTATTCGGAAAACTCAGATCATTACGAGTTACAAAAGGTGAAAGCTGCATAA

Peptide Sequence

PEP ID

XP_016469125.1
PEP Infomation

PREDICTED: protein DETOXIFICATION 46, chloroplastic-like [Nicotiana tabacum]
Sequence

MNVETLTCKSHIPIKNPKFNPNFHVDFSSTRLRTCRVTPLTRICNLRRRIITACVNPSHE
IPVKLESLNLNSSISEEADEEQVEAVTVREEINSVVDSNGKGEFSGNESIWAQVVEIVKF
SGPAVGLWVCGPLMSLIDTAVIGQGSSIELAALGPGTVFCDNTSYVFMFLSIATSNLVAT
ALAGQDKNEVQHQISILLFIGLACGVVMFVFTRLLGTWGLTAFTGAKNTEIINAANTYVQ
IRGFAWPAMLVGWVAQSASLGMKDSWGPLKALAVATVINGIGDIVLCRFFGYGIAGAAWA
TMVSQVVAAYMMIEALNNKGYNGFAISVPSLNEVLQIFILAAPVFLTMMSKVAFYSLLVY
YATSMGTNTAAAHQVMLQLFCICAVWGEPLSQTAQSFMPELLYGVNRNLSKARMLLKSLL
IIGASNGLLLGSVGVSVTWFFPKIFSPDPLVIEEMHKVLLPLFLALWVSPCVHSLEGTLL
AGRDLKFISISMTAVFGLASLLVMLLSSKGFGLPGCWFALVAFQWSRFSIALRRLTLADG
MLYSENSDHYELQKVKAA

Transcript Sequence

Gene sequence data has not been registered.